English
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Synapse

Biomedical data platform for sharing, accessing, and analyzing large-scale research datasets with collaboration tools

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synapse.org
Verified API available Works with Claude AI Free tier ~15k monthly visits
What is it Biomedical data platform for sharing, accessing, and analyzing large-scale research datasets with collaboration tools
Pricing Freemium
Free tier Yes
Platform Web Application
API Yes
Works with Claude AI
Best for sharing biomedical datasets, collaborating on research projects
Domain registered 2000

Data updated Aug. 1, 2026

What does Synapse do?

Synapse is a biomedical data platform built by Sage Bionetworks. It gives researchers a central place to share, access, and analyze large-scale datasets. The platform hosts petabytes of data from studies on Alzheimer's disease, cancer, Parkinson's, and more. Instead of hunting through scattered repositories, scientists can search for datasets, browse trending projects, and dive into the data directly from their browser or via APIs.

What makes Synapse stand out is its focus on reproducibility and responsible data sharing. Every analysis can be tracked with provenance records, so others see exactly how results were produced. The platform supports integration with R, Python, and the command line, letting researchers work in their preferred environment. Sensitive data is protected through granular access controls, audits, and privacy tools. Synapse also powers specialized portals where research communities can exchange data, tools, and ideas.

This tool is built for biomedical researchers, data scientists, and institutions that need to manage large volumes of human health data. It's especially useful for multi-institutional collaborations where data sharing and governance are critical. Whether you're searching for a specific genomic dataset or running a challenge to benchmark algorithms, Synapse provides the infrastructure to make open science practical.

Other Non-AI — Other

Key features

What makes it stand out
01
Access and query data via APIs for R, Python, and command line
02
Record and display provenance of analyses at every step
03
Comprehensive data governance with access controls, audits, and privacy-enhancing technologies
04
Create portals for research communities to accelerate biomedical progress
05
Track trending projects and datasets with usage statistics

Who is Synapse for?

Who benefits most from this tool
sharing biomedical datasets
collaborating on research projects
analyzing large-scale genomic and clinical data

Pricing

Free tier available — start without a credit card

Free

Free
  • <100 GB storage
  • <100 GB of content
  • Sage Managed Individual Storage
  • Free Synapse Features
  • DOIs for publications & grants*
  • Online documentation & tutorials*
  • Project wikis*
  • Discussion forums*

Self-Managed Plan

Custom
  • <500 GB storage
  • <500 GB of content
  • Secure cloud storage
  • Project assistance
  • Governance consulting
  • NIH Data Management Sharing Plan Support
  • Help Desk Support
  • Sharing Content Through Controlled Access

Data Coordination

Custom
  • Unlimited storage
  • Unlimited data allowance
  • Custom data storage locations
  • Fully managed project set up, access and documentation
  • Tailor-made portal interface
  • Data integration with existing tools and workflows
  • Customized governance support
  • Dedicated Sage Bionetworks point of contact
  • Unlimited end-to-end support

Trust & presence

Domain Domain registered 2000

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